Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mre11Q61216 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mre11Q61216 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.29■□□□□ 0.52
Mre11Q61216 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.29■□□□□ 0.52
Mre11Q61216 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mre11Q61216 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mre11Q61216 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mre11Q61216 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mre11Q61216 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC18.29■□□□□ 0.52
Mre11Q61216 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mre11Q61216 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mre11Q61216 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mre11Q61216 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mre11Q61216 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Mre11Q61216 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mre11Q61216 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Mre11Q61216 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mre11Q61216 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mre11Q61216 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mre11Q61216 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mre11Q61216 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.28■□□□□ 0.52
Mre11Q61216 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mre11Q61216 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mre11Q61216 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Mre11Q61216 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.28■□□□□ 0.52
Mre11Q61216 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.28■□□□□ 0.52
Mre11Q61216 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.28■□□□□ 0.52
Mre11Q61216 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mre11Q61216 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC18.28■□□□□ 0.52
Mre11Q61216 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mre11Q61216 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Mre11Q61216 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mre11Q61216 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mre11Q61216 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mre11Q61216 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Mre11Q61216 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mre11Q61216 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.28■□□□□ 0.52
Mre11Q61216 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mre11Q61216 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mre11Q61216 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mre11Q61216 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mre11Q61216 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Mre11Q61216 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Mre11Q61216 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Mre11Q61216 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Mre11Q61216 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.27■□□□□ 0.52
Mre11Q61216 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mre11Q61216 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.27■□□□□ 0.52
Mre11Q61216 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Mre11Q61216 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mre11Q61216 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mre11Q61216 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mre11Q61216 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mre11Q61216 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Mre11Q61216 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Mre11Q61216 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mre11Q61216 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mre11Q61216 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.26■□□□□ 0.51
Mre11Q61216 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.26■□□□□ 0.51
Mre11Q61216 Odf3b-204ENSMUST00000227834 930 ntBASIC18.26■□□□□ 0.51
Mre11Q61216 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mre11Q61216 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.26■□□□□ 0.51
Mre11Q61216 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mre11Q61216 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Mre11Q61216 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Mre11Q61216 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Mre11Q61216 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Mre11Q61216 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mre11Q61216 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mre11Q61216 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mre11Q61216 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mre11Q61216 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mre11Q61216 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mre11Q61216 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Mre11Q61216 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.25■□□□□ 0.51
Mre11Q61216 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mre11Q61216 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mre11Q61216 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mre11Q61216 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mre11Q61216 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mre11Q61216 AC166491.1-201ENSMUST00000227053 2308 ntBASIC18.25■□□□□ 0.51
Mre11Q61216 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.25■□□□□ 0.51
Mre11Q61216 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.25■□□□□ 0.51
Mre11Q61216 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms