Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Mir6956-201ENSMUST00000183598 62 ntBASIC17.47■□□□□ 0.39
Scnn1aQ61180 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.47■□□□□ 0.39
Scnn1aQ61180 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scnn1aQ61180 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.47■□□□□ 0.39
Scnn1aQ61180 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.47■□□□□ 0.39
Scnn1aQ61180 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scnn1aQ61180 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scnn1aQ61180 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.47■□□□□ 0.39
Scnn1aQ61180 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scnn1aQ61180 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scnn1aQ61180 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scnn1aQ61180 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scnn1aQ61180 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Scnn1aQ61180 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.47■□□□□ 0.39
Scnn1aQ61180 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Scnn1aQ61180 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.47■□□□□ 0.39
Scnn1aQ61180 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scnn1aQ61180 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scnn1aQ61180 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.47■□□□□ 0.39
Scnn1aQ61180 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.47■□□□□ 0.39
Scnn1aQ61180 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.47■□□□□ 0.39
Scnn1aQ61180 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Mir449b-201ENSMUST00000104833 80 ntBASIC17.46■□□□□ 0.39
Scnn1aQ61180 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.46■□□□□ 0.39
Scnn1aQ61180 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Gm25948-201ENSMUST00000175334 112 ntBASIC17.46■□□□□ 0.39
Scnn1aQ61180 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.46■□□□□ 0.39
Scnn1aQ61180 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.46■□□□□ 0.39
Scnn1aQ61180 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scnn1aQ61180 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Scnn1aQ61180 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Scnn1aQ61180 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.45■□□□□ 0.38
Scnn1aQ61180 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Gm2810-201ENSMUST00000118681 990 ntBASIC17.45■□□□□ 0.38
Scnn1aQ61180 Gm11543-201ENSMUST00000120758 370 ntBASIC17.45■□□□□ 0.38
Scnn1aQ61180 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.45■□□□□ 0.38
Scnn1aQ61180 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.45■□□□□ 0.38
Scnn1aQ61180 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Gm10253-201ENSMUST00000194270 940 ntBASIC17.45■□□□□ 0.38
Scnn1aQ61180 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.45■□□□□ 0.38
Scnn1aQ61180 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scnn1aQ61180 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scnn1aQ61180 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scnn1aQ61180 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scnn1aQ61180 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scnn1aQ61180 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scnn1aQ61180 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scnn1aQ61180 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scnn1aQ61180 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.44■□□□□ 0.38
Scnn1aQ61180 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.44■□□□□ 0.38
Scnn1aQ61180 Gm15483-201ENSMUST00000120338 456 ntBASIC17.44■□□□□ 0.38
Scnn1aQ61180 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scnn1aQ61180 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.44■□□□□ 0.38
Scnn1aQ61180 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scnn1aQ61180 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scnn1aQ61180 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scnn1aQ61180 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scnn1aQ61180 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scnn1aQ61180 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scnn1aQ61180 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scnn1aQ61180 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.44■□□□□ 0.38
Scnn1aQ61180 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms