Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm27701-201ENSMUST00000184498 110 ntBASIC21.69■■□□□ 1.06
Ptch1Q61115 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC21.69■■□□□ 1.06
Ptch1Q61115 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC21.69■■□□□ 1.06
Ptch1Q61115 AC154687.2-201ENSMUST00000223853 640 ntBASIC21.69■■□□□ 1.06
Ptch1Q61115 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptch1Q61115 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptch1Q61115 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.69■■□□□ 1.06
Ptch1Q61115 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptch1Q61115 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptch1Q61115 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ptch1Q61115 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptch1Q61115 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptch1Q61115 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptch1Q61115 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptch1Q61115 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ptch1Q61115 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC21.68■■□□□ 1.06
Ptch1Q61115 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ptch1Q61115 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptch1Q61115 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch1Q61115 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch1Q61115 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch1Q61115 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch1Q61115 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch1Q61115 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch1Q61115 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch1Q61115 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch1Q61115 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC21.67■■□□□ 1.06
Ptch1Q61115 Gm4984-201ENSMUST00000115987 360 ntBASIC21.67■■□□□ 1.06
Ptch1Q61115 Gm12957-201ENSMUST00000117835 377 ntBASIC21.67■■□□□ 1.06
Ptch1Q61115 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC21.67■■□□□ 1.06
Ptch1Q61115 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
Ptch1Q61115 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC21.67■■□□□ 1.06
Ptch1Q61115 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch1Q61115 Gm45098-201ENSMUST00000207179 657 ntBASIC21.67■■□□□ 1.06
Ptch1Q61115 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch1Q61115 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch1Q61115 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch1Q61115 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch1Q61115 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC21.67■■□□□ 1.06
Ptch1Q61115 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch1Q61115 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptch1Q61115 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC21.67■■□□□ 1.06
Ptch1Q61115 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptch1Q61115 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Ptch1Q61115 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptch1Q61115 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC21.66■■□□□ 1.06
Ptch1Q61115 Gm4691-201ENSMUST00000182339 1000 ntBASIC21.66■■□□□ 1.06
Ptch1Q61115 Gm2451-201ENSMUST00000199447 999 ntBASIC21.66■■□□□ 1.06
Ptch1Q61115 Gm10290-201ENSMUST00000200451 999 ntBASIC21.66■■□□□ 1.06
Ptch1Q61115 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ptch1Q61115 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptch1Q61115 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptch1Q61115 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptch1Q61115 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptch1Q61115 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptch1Q61115 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptch1Q61115 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptch1Q61115 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ptch1Q61115 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptch1Q61115 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Ptch1Q61115 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC21.65■■□□□ 1.06
Ptch1Q61115 Gm19220-201ENSMUST00000222682 803 ntBASIC21.65■■□□□ 1.06
Ptch1Q61115 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Ptch1Q61115 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptch1Q61115 Ntrk2-205ENSMUST00000224402 2284 ntBASIC21.65■■□□□ 1.06
Ptch1Q61115 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptch1Q61115 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptch1Q61115 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ptch1Q61115 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ptch1Q61115 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptch1Q61115 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptch1Q61115 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptch1Q61115 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptch1Q61115 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ptch1Q61115 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
Ptch1Q61115 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ptch1Q61115 Mir1982-201ENSMUST00000157368 74 ntBASIC21.64■■□□□ 1.06
Ptch1Q61115 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Ptch1Q61115 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC21.64■■□□□ 1.06
Ptch1Q61115 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC21.64■■□□□ 1.06
Ptch1Q61115 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Ptch1Q61115 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ptch1Q61115 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ptch1Q61115 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptch1Q61115 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptch1Q61115 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptch1Q61115 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptch1Q61115 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC21.64■■□□□ 1.05
Ptch1Q61115 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC21.64■■□□□ 1.05
Ptch1Q61115 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptch1Q61115 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Ptch1Q61115 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptch1Q61115 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ptch1Q61115 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ptch1Q61115 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptch1Q61115 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC21.63■■□□□ 1.05
Ptch1Q61115 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptch1Q61115 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Ptch1Q61115 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptch1Q61115 Gm27892-201ENSMUST00000185017 106 ntBASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms