Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Col12a1Q60847 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col12a1Q60847 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col12a1Q60847 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col12a1Q60847 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col12a1Q60847 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col12a1Q60847 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col12a1Q60847 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col12a1Q60847 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col12a1Q60847 Gm15236-201ENSMUST00000117309 379 ntBASIC14.86□□□□□ -0.03
Col12a1Q60847 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col12a1Q60847 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col12a1Q60847 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.86□□□□□ -0.03
Col12a1Q60847 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.86□□□□□ -0.03
Col12a1Q60847 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col12a1Q60847 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col12a1Q60847 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col12a1Q60847 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Col12a1Q60847 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Col12a1Q60847 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.85□□□□□ -0.03
Col12a1Q60847 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col12a1Q60847 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Col12a1Q60847 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.85□□□□□ -0.03
Col12a1Q60847 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col12a1Q60847 Gm27701-201ENSMUST00000184498 110 ntBASIC14.85□□□□□ -0.03
Col12a1Q60847 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.85□□□□□ -0.03
Col12a1Q60847 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.85□□□□□ -0.03
Col12a1Q60847 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col12a1Q60847 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col12a1Q60847 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col12a1Q60847 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.85□□□□□ -0.03
Col12a1Q60847 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col12a1Q60847 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col12a1Q60847 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col12a1Q60847 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
Col12a1Q60847 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col12a1Q60847 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col12a1Q60847 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col12a1Q60847 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col12a1Q60847 Gm14660-201ENSMUST00000119809 575 ntBASIC14.85□□□□□ -0.03
Col12a1Q60847 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col12a1Q60847 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.85□□□□□ -0.03
Col12a1Q60847 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col12a1Q60847 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Col12a1Q60847 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col12a1Q60847 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col12a1Q60847 Gm12390-201ENSMUST00000117897 397 ntBASIC14.84□□□□□ -0.03
Col12a1Q60847 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.84□□□□□ -0.03
Col12a1Q60847 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Col12a1Q60847 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.84□□□□□ -0.03
Col12a1Q60847 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.84□□□□□ -0.03
Col12a1Q60847 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col12a1Q60847 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Col12a1Q60847 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col12a1Q60847 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col12a1Q60847 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col12a1Q60847 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Col12a1Q60847 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col12a1Q60847 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col12a1Q60847 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.84□□□□□ -0.03
Col12a1Q60847 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col12a1Q60847 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col12a1Q60847 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col12a1Q60847 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Col12a1Q60847 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col12a1Q60847 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col12a1Q60847 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col12a1Q60847 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.83□□□□□ -0.03
Col12a1Q60847 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col12a1Q60847 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col12a1Q60847 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.83□□□□□ -0.03
Col12a1Q60847 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.83□□□□□ -0.03
Col12a1Q60847 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.83□□□□□ -0.03
Col12a1Q60847 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col12a1Q60847 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col12a1Q60847 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col12a1Q60847 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Col12a1Q60847 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col12a1Q60847 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col12a1Q60847 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.83□□□□□ -0.04
Col12a1Q60847 Gm16476-201ENSMUST00000221544 139 ntBASIC14.83□□□□□ -0.04
Col12a1Q60847 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Col12a1Q60847 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col12a1Q60847 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col12a1Q60847 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Col12a1Q60847 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col12a1Q60847 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col12a1Q60847 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col12a1Q60847 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.83□□□□□ -0.04
Col12a1Q60847 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Col12a1Q60847 Gm23931-201ENSMUST00000103842 109 ntBASIC14.83□□□□□ -0.04
Col12a1Q60847 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col12a1Q60847 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Col12a1Q60847 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.82□□□□□ -0.04
Col12a1Q60847 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col12a1Q60847 App-207ENSMUST00000227737 2827 ntBASIC14.82□□□□□ -0.04
Col12a1Q60847 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.82□□□□□ -0.04
Col12a1Q60847 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col12a1Q60847 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.82□□□□□ -0.04
Col12a1Q60847 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms