Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.53□□□□□ -0.08
Nr1h4Q60641 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1h4Q60641 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1h4Q60641 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1h4Q60641 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1h4Q60641 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1h4Q60641 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Nr1h4Q60641 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1h4Q60641 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1h4Q60641 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1h4Q60641 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1h4Q60641 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1h4Q60641 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1h4Q60641 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.52□□□□□ -0.09
Nr1h4Q60641 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1h4Q60641 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.52□□□□□ -0.09
Nr1h4Q60641 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Nr1h4Q60641 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1h4Q60641 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1h4Q60641 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1h4Q60641 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1h4Q60641 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1h4Q60641 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1h4Q60641 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1h4Q60641 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Nr1h4Q60641 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1h4Q60641 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1h4Q60641 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.51□□□□□ -0.09
Nr1h4Q60641 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.51□□□□□ -0.09
Nr1h4Q60641 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Rprl3-201ENSMUST00000157400 290 ntBASIC14.51□□□□□ -0.09
Nr1h4Q60641 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.51□□□□□ -0.09
Nr1h4Q60641 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nr1h4Q60641 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nr1h4Q60641 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.5□□□□□ -0.09
Nr1h4Q60641 Gm6345-202ENSMUST00000180900 204 ntBASIC14.5□□□□□ -0.09
Nr1h4Q60641 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nr1h4Q60641 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.5□□□□□ -0.09
Nr1h4Q60641 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nr1h4Q60641 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms