Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Gm10313-201ENSMUST00000095320 1002 ntBASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scaf1Q5U4C3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Gm8749-201ENSMUST00000117737 331 ntBASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Gm27533-201ENSMUST00000183800 152 ntBASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Scaf1Q5U4C3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Scaf1Q5U4C3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf1Q5U4C3 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.77■□□□□ 0.76
Scaf1Q5U4C3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf1Q5U4C3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Scaf1Q5U4C3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC19.77■□□□□ 0.76
Scaf1Q5U4C3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Scaf1Q5U4C3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf1Q5U4C3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf1Q5U4C3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Scaf1Q5U4C3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf1Q5U4C3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf1Q5U4C3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.77■□□□□ 0.76
Scaf1Q5U4C3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.77■□□□□ 0.76
Scaf1Q5U4C3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf1Q5U4C3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scaf1Q5U4C3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scaf1Q5U4C3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scaf1Q5U4C3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Gm9063-201ENSMUST00000223299 582 ntBASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf1Q5U4C3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.75■□□□□ 0.75
Scaf1Q5U4C3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf1Q5U4C3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Scaf1Q5U4C3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Scaf1Q5U4C3 Gm13823-201ENSMUST00000119930 345 ntBASIC19.75■□□□□ 0.75
Scaf1Q5U4C3 Gm27989-201ENSMUST00000184721 107 ntBASIC19.75■□□□□ 0.75
Scaf1Q5U4C3 Gm6888-201ENSMUST00000221983 706 ntBASIC19.75■□□□□ 0.75
Scaf1Q5U4C3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf1Q5U4C3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf1Q5U4C3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC19.75■□□□□ 0.75
Scaf1Q5U4C3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf1Q5U4C3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf1Q5U4C3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms