Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Shroom1Q5SX79 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Gm15427-201ENSMUST00000117288 531 ntBASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Shroom1Q5SX79 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Shroom1Q5SX79 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Shroom1Q5SX79 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Gm45747-201ENSMUST00000212203 999 ntBASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.2■□□□□ 0.18
Shroom1Q5SX79 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shroom1Q5SX79 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms