Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7d-4Q5R1H9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Gm11336-201ENSMUST00000118168 334 ntBASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Trav7d-4Q5R1H9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7d-4Q5R1H9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7d-4Q5R1H9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Trav7d-4Q5R1H9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7d-4Q5R1H9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7d-4Q5R1H9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7d-4Q5R1H9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7d-4Q5R1H9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Gm23547-201ENSMUST00000158210 271 ntBASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7d-4Q5R1H9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms