Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-3Q5R1E6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Mir7071-201ENSMUST00000184847 69 ntBASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Efs-202ENSMUST00000227037 2540 ntBASIC12.24□□□□□ -0.45
Trav6-3Q5R1E6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav6-3Q5R1E6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms