Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.77□□□□□ -0.04
Trav8d-2Q5R1B6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-2Q5R1B6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-2Q5R1B6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-2Q5R1B6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-2Q5R1B6 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.77□□□□□ -0.04
Trav8d-2Q5R1B6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
Trav8d-2Q5R1B6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.77□□□□□ -0.04
Trav8d-2Q5R1B6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-2Q5R1B6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-2Q5R1B6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-2Q5R1B6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Trav8d-2Q5R1B6 Gm24543-201ENSMUST00000103867 82 ntBASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Gm14928-201ENSMUST00000120198 477 ntBASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Gm15321-201ENSMUST00000121290 288 ntBASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav8d-2Q5R1B6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-2Q5R1B6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Rarb-207ENSMUST00000225921 2756 ntBASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Gm9719-201ENSMUST00000162765 543 ntBASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Asic1-205ENSMUST00000228185 1818 ntBASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-2Q5R1B6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms