Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm23689-201ENSMUST00000180354 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm27359-201ENSMUST00000184153 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm27785-201ENSMUST00000184268 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm27466-201ENSMUST00000184396 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm27703-201ENSMUST00000184836 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm38294-201ENSMUST00000192831 381 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm6018-201ENSMUST00000216090 1306 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Trim41Q5NCC3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Trim41Q5NCC3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trim41Q5NCC3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trim41Q5NCC3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC26.33■■□□□ 1.81
Trim41Q5NCC3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Trim41Q5NCC3 Gm16215-201ENSMUST00000161990 637 ntBASIC26.33■■□□□ 1.81
Trim41Q5NCC3 Gm24158-201ENSMUST00000175263 71 ntBASIC26.33■■□□□ 1.81
Trim41Q5NCC3 Gm5779-201ENSMUST00000218467 910 ntBASIC26.33■■□□□ 1.81
Trim41Q5NCC3 CT009510.1-201ENSMUST00000227972 270 ntBASIC26.33■■□□□ 1.81
Trim41Q5NCC3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trim41Q5NCC3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trim41Q5NCC3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Trim41Q5NCC3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Trim41Q5NCC3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Trim41Q5NCC3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Trim41Q5NCC3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim41Q5NCC3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim41Q5NCC3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Trim41Q5NCC3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim41Q5NCC3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim41Q5NCC3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim41Q5NCC3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim41Q5NCC3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim41Q5NCC3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
Trim41Q5NCC3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC26.32■■□□□ 1.8
Trim41Q5NCC3 Gm16026-204ENSMUST00000162652 683 ntBASIC26.32■■□□□ 1.8
Trim41Q5NCC3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim41Q5NCC3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim41Q5NCC3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim41Q5NCC3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC26.32■■□□□ 1.8
Trim41Q5NCC3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim41Q5NCC3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Gm25287-201ENSMUST00000103846 110 ntBASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Gm22918-201ENSMUST00000103855 110 ntBASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Gm17837-201ENSMUST00000186435 985 ntBASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Gm19430-201ENSMUST00000193847 2137 ntBASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Trim41Q5NCC3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Gm45384-201ENSMUST00000210451 277 ntBASIC26.3■■□□□ 1.8
Trim41Q5NCC3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC26.3■■□□□ 1.8
Trim41Q5NCC3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim41Q5NCC3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC26.29■■□□□ 1.8
Trim41Q5NCC3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim41Q5NCC3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC26.29■■□□□ 1.8
Trim41Q5NCC3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim41Q5NCC3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim41Q5NCC3 Gm6973-201ENSMUST00000117080 721 ntBASIC26.29■■□□□ 1.8
Trim41Q5NCC3 Gm11478-201ENSMUST00000117851 599 ntBASIC26.29■■□□□ 1.8
Trim41Q5NCC3 AC131710.1-201ENSMUST00000228336 990 ntBASIC26.29■■□□□ 1.8
Trim41Q5NCC3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Trim41Q5NCC3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Trim41Q5NCC3 Gm5357-201ENSMUST00000212720 1924 ntBASIC26.29■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms