Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Gm18489-201ENSMUST00000172565 551 ntBASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Gm7230-201ENSMUST00000173026 815 ntBASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Gm37153-201ENSMUST00000193637 231 ntBASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf20Q5DTM8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf20Q5DTM8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Rnf20Q5DTM8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 Mir8098-201ENSMUST00000184011 137 ntBASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.13■□□□□ 0.49
Rnf20Q5DTM8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Gm7862-201ENSMUST00000121461 292 ntBASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.12■□□□□ 0.49
Rnf20Q5DTM8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms