Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Herc2Q4U2R1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Herc2Q4U2R1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Herc2Q4U2R1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Herc2Q4U2R1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Herc2Q4U2R1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC8.9□□□□□ -0.99
Herc2Q4U2R1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC8.9□□□□□ -0.99
Herc2Q4U2R1 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC8.9□□□□□ -0.99
Herc2Q4U2R1 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC8.9□□□□□ -0.99
Herc2Q4U2R1 Gm6334-201ENSMUST00000207083 228 ntBASIC8.9□□□□□ -0.99
Herc2Q4U2R1 Gm8959-201ENSMUST00000213150 571 ntBASIC8.9□□□□□ -0.99
Herc2Q4U2R1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC8.9□□□□□ -0.99
Herc2Q4U2R1 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Herc2Q4U2R1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Herc2Q4U2R1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Herc2Q4U2R1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Herc2Q4U2R1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC8.9□□□□□ -0.99
Herc2Q4U2R1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Gm43058-201ENSMUST00000197645 625 ntBASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Gm10702-201ENSMUST00000098929 1268 ntBASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Gm13337-201ENSMUST00000119183 1594 ntBASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Gm9368-201ENSMUST00000219348 831 ntBASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Gm24255-201ENSMUST00000104481 128 ntBASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Gm6222-201ENSMUST00000120787 396 ntBASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Gm42997-202ENSMUST00000200321 985 ntBASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Herc2Q4U2R1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Gm8597-201ENSMUST00000191525 1109 ntBASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Gm18935-201ENSMUST00000212692 664 ntBASIC8.88□□□□□ -0.99
Herc2Q4U2R1 AC155258.1-201ENSMUST00000219303 253 ntBASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Gm10156-201ENSMUST00000122364 462 ntBASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Snora73a-201ENSMUST00000082453 205 ntBASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Gm13050-201ENSMUST00000122149 1345 ntBASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC8.88□□□□□ -0.99
Herc2Q4U2R1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Herc2Q4U2R1 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms