Protein–RNA interactions for Protein: Q3UXB0

Mbd3l2, Methyl-CpG-binding domain protein 3-like 2, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l2Q3UXB0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mbd3l2Q3UXB0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Mbd3l2Q3UXB0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Mbd3l2Q3UXB0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mbd3l2Q3UXB0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.06□□□□□ -0.48
Mbd3l2Q3UXB0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Mir5130-201ENSMUST00000175160 84 ntBASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Gm18959-201ENSMUST00000208954 655 ntBASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Mbd3l2Q3UXB0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Mir1668-201ENSMUST00000184114 107 ntBASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Gm7213-201ENSMUST00000215977 950 ntBASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.04□□□□□ -0.48
Mbd3l2Q3UXB0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms