Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.25■□□□□ 0.03
Fam196aQ3USH1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Gm14722-201ENSMUST00000118943 689 ntBASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Gm17150-201ENSMUST00000165577 381 ntBASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Gm42612-201ENSMUST00000197986 623 ntBASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Gm43170-201ENSMUST00000199827 612 ntBASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fam196aQ3USH1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Gm11918-201ENSMUST00000121660 179 ntBASIC15.23■□□□□ 0.03
Fam196aQ3USH1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Dancr-204ENSMUST00000132389 2347 ntBASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fam196aQ3USH1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Gm9719-201ENSMUST00000162765 543 ntBASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Gm37917-201ENSMUST00000194711 392 ntBASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Shd-206ENSMUST00000225145 998 ntBASIC15.22■□□□□ 0.03
Fam196aQ3USH1 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fam196aQ3USH1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Fam196aQ3USH1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms