Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.64□□□□□ -0.39
Znf48Q3US17 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Znf48Q3US17 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.64□□□□□ -0.39
Znf48Q3US17 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.64□□□□□ -0.39
Znf48Q3US17 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Znf48Q3US17 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.63□□□□□ -0.39
Znf48Q3US17 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Znf48Q3US17 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.63□□□□□ -0.39
Znf48Q3US17 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.63□□□□□ -0.39
Znf48Q3US17 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Gm9727-201ENSMUST00000161387 555 ntBASIC12.63□□□□□ -0.39
Znf48Q3US17 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.63□□□□□ -0.39
Znf48Q3US17 Auts2-212ENSMUST00000178555 309 ntBASIC12.63□□□□□ -0.39
Znf48Q3US17 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.63□□□□□ -0.39
Znf48Q3US17 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.63□□□□□ -0.39
Znf48Q3US17 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.63□□□□□ -0.39
Znf48Q3US17 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.63□□□□□ -0.39
Znf48Q3US17 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Znf48Q3US17 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Znf48Q3US17 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Znf48Q3US17 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Znf48Q3US17 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Znf48Q3US17 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.62□□□□□ -0.39
Znf48Q3US17 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.62□□□□□ -0.39
Znf48Q3US17 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.62□□□□□ -0.39
Znf48Q3US17 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Znf48Q3US17 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Znf48Q3US17 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.62□□□□□ -0.39
Znf48Q3US17 Gm26308-201ENSMUST00000157768 69 ntBASIC12.62□□□□□ -0.39
Znf48Q3US17 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Znf48Q3US17 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.62□□□□□ -0.39
Znf48Q3US17 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.62□□□□□ -0.39
Znf48Q3US17 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 AV026068-213ENSMUST00000223675 1171 ntBASIC12.62□□□□□ -0.39
Znf48Q3US17 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.62□□□□□ -0.39
Znf48Q3US17 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Znf48Q3US17 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.62□□□□□ -0.39
Znf48Q3US17 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Znf48Q3US17 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.61□□□□□ -0.39
Znf48Q3US17 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms