Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shisa3Q3UPR0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shisa3Q3UPR0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.17□□□□□ -0.3
Shisa3Q3UPR0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 155.9 ms