Protein–RNA interactions for Protein: Q3TMP1

Gtf3c3, General transcription factor IIIC, polypeptide 3, mousemouse

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c3Q3TMP1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 Gm11355-201ENSMUST00000121120 306 ntBASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 Gm7889-201ENSMUST00000185591 958 ntBASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 Gm43799-201ENSMUST00000201845 579 ntBASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.49■□□□□ 0.55
Gtf3c3Q3TMP1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Gm18101-201ENSMUST00000215769 548 ntBASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3c3Q3TMP1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Gm21559-201ENSMUST00000220638 855 ntBASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Gm8587-201ENSMUST00000076538 843 ntBASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3c3Q3TMP1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 Gm45638-201ENSMUST00000211507 2878 ntBASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gtf3c3Q3TMP1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.45■□□□□ 0.54
Gtf3c3Q3TMP1 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3c3Q3TMP1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3c3Q3TMP1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3c3Q3TMP1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3c3Q3TMP1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3c3Q3TMP1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Gtf3c3Q3TMP1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Gtf3c3Q3TMP1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.45■□□□□ 0.54
Gtf3c3Q3TMP1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Gtf3c3Q3TMP1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Gtf3c3Q3TMP1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3c3Q3TMP1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3c3Q3TMP1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms