Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Arhgef33-207ENSMUST00000224966 490 ntBASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 AC153974.2-201ENSMUST00000218577 1025 ntBASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Gm8598-201ENSMUST00000221184 836 ntBASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Gm18893-201ENSMUST00000198416 943 ntBASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Gm44985-201ENSMUST00000206202 1016 ntBASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Gm18935-201ENSMUST00000212692 664 ntBASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm2606-201ENSMUST00000100754 1002 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm12537-201ENSMUST00000119266 1002 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm12070-201ENSMUST00000119551 1002 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm12671-201ENSMUST00000119978 1002 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm13292-201ENSMUST00000120014 1000 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm10359-201ENSMUST00000180167 1002 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm12033-201ENSMUST00000180654 1002 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm5559-201ENSMUST00000180755 1002 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm3508-201ENSMUST00000186012 792 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm7293-201ENSMUST00000216682 1007 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm43006-201ENSMUST00000197702 1602 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm14026-201ENSMUST00000120625 1789 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm44126-201ENSMUST00000204831 514 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Olfr284-202ENSMUST00000206647 966 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm44545-201ENSMUST00000208262 746 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm24644-201ENSMUST00000157114 139 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm6621-201ENSMUST00000193251 772 ntBASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ush2AQ2QI47 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Ush2AQ2QI47 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Ush2AQ2QI47 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Ush2AQ2QI47 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC7.96□□□□□ -1.13
Ush2AQ2QI47 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC7.96□□□□□ -1.13
Ush2AQ2QI47 Gm45293-201ENSMUST00000209754 1812 ntBASIC7.96□□□□□ -1.13
Ush2AQ2QI47 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms