Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shroom4Q1W617 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shroom4Q1W617 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Shroom4Q1W617 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shroom4Q1W617 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC23.81■■□□□ 1.4
Shroom4Q1W617 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC23.81■■□□□ 1.4
Shroom4Q1W617 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shroom4Q1W617 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shroom4Q1W617 AC163637.1-201ENSMUST00000215491 1894 ntBASIC23.81■■□□□ 1.4
Shroom4Q1W617 AC154239.3-201ENSMUST00000226933 674 ntBASIC23.81■■□□□ 1.4
Shroom4Q1W617 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shroom4Q1W617 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shroom4Q1W617 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shroom4Q1W617 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shroom4Q1W617 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shroom4Q1W617 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Shroom4Q1W617 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Shroom4Q1W617 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
Shroom4Q1W617 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Shroom4Q1W617 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Shroom4Q1W617 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC23.8■■□□□ 1.4
Shroom4Q1W617 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Shroom4Q1W617 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Shroom4Q1W617 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Shroom4Q1W617 Gm8515-201ENSMUST00000194852 576 ntBASIC23.8■■□□□ 1.4
Shroom4Q1W617 Olfr286-202ENSMUST00000205305 969 ntBASIC23.8■■□□□ 1.4
Shroom4Q1W617 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC23.8■■□□□ 1.4
Shroom4Q1W617 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Shroom4Q1W617 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shroom4Q1W617 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shroom4Q1W617 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shroom4Q1W617 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Shroom4Q1W617 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shroom4Q1W617 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Shroom4Q1W617 Gm7820-201ENSMUST00000121012 1052 ntBASIC23.79■■□□□ 1.4
Shroom4Q1W617 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Shroom4Q1W617 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC23.79■■□□□ 1.4
Shroom4Q1W617 Gm42612-201ENSMUST00000197986 623 ntBASIC23.79■■□□□ 1.4
Shroom4Q1W617 Gm43170-201ENSMUST00000199827 612 ntBASIC23.79■■□□□ 1.4
Shroom4Q1W617 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shroom4Q1W617 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shroom4Q1W617 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shroom4Q1W617 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shroom4Q1W617 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Shroom4Q1W617 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC23.79■■□□□ 1.4
Shroom4Q1W617 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shroom4Q1W617 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shroom4Q1W617 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shroom4Q1W617 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shroom4Q1W617 Ldb3-207ENSMUST00000227819 1499 ntBASIC23.78■■□□□ 1.4
Shroom4Q1W617 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shroom4Q1W617 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shroom4Q1W617 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shroom4Q1W617 Gm12138-201ENSMUST00000122180 951 ntBASIC23.78■■□□□ 1.4
Shroom4Q1W617 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Shroom4Q1W617 Gm21854-201ENSMUST00000179901 471 ntBASIC23.78■■□□□ 1.4
Shroom4Q1W617 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Shroom4Q1W617 Gm20445-201ENSMUST00000061905 565 ntBASIC23.78■■□□□ 1.4
Shroom4Q1W617 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Shroom4Q1W617 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Shroom4Q1W617 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shroom4Q1W617 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shroom4Q1W617 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC23.78■■□□□ 1.4
Shroom4Q1W617 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Shroom4Q1W617 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Shroom4Q1W617 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Shroom4Q1W617 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Shroom4Q1W617 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Shroom4Q1W617 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Shroom4Q1W617 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC23.77■■□□□ 1.4
Shroom4Q1W617 Gm6944-201ENSMUST00000182449 1006 ntBASIC23.77■■□□□ 1.4
Shroom4Q1W617 Gm45059-201ENSMUST00000205558 1077 ntBASIC23.77■■□□□ 1.4
Shroom4Q1W617 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC23.77■■□□□ 1.4
Shroom4Q1W617 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Shroom4Q1W617 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Shroom4Q1W617 Tfap2a-203ENSMUST00000223869 2037 ntBASIC23.77■■□□□ 1.4
Shroom4Q1W617 Gm45244-201ENSMUST00000211328 2200 ntBASIC23.77■■□□□ 1.4
Shroom4Q1W617 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom4Q1W617 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC23.76■■□□□ 1.39
Shroom4Q1W617 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC23.76■■□□□ 1.39
Shroom4Q1W617 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom4Q1W617 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Shroom4Q1W617 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom4Q1W617 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom4Q1W617 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom4Q1W617 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom4Q1W617 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom4Q1W617 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Shroom4Q1W617 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom4Q1W617 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom4Q1W617 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom4Q1W617 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom4Q1W617 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom4Q1W617 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom4Q1W617 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom4Q1W617 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Shroom4Q1W617 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC23.75■■□□□ 1.39
Shroom4Q1W617 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC23.75■■□□□ 1.39
Shroom4Q1W617 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom4Q1W617 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms