Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pfdn6Q03958 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.32■□□□□ 0.04
Pfdn6Q03958 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pfdn6Q03958 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.32■□□□□ 0.04
Pfdn6Q03958 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Pfdn6Q03958 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.32■□□□□ 0.04
Pfdn6Q03958 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pfdn6Q03958 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pfdn6Q03958 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pfdn6Q03958 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pfdn6Q03958 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pfdn6Q03958 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pfdn6Q03958 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Pfdn6Q03958 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.32■□□□□ 0.04
Pfdn6Q03958 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pfdn6Q03958 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Gm4535-201ENSMUST00000182274 558 ntBASIC15.31■□□□□ 0.04
Pfdn6Q03958 Gm28033-201ENSMUST00000184224 96 ntBASIC15.31■□□□□ 0.04
Pfdn6Q03958 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.31■□□□□ 0.04
Pfdn6Q03958 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.31■□□□□ 0.04
Pfdn6Q03958 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.31■□□□□ 0.04
Pfdn6Q03958 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.31■□□□□ 0.04
Pfdn6Q03958 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Gm10355-201ENSMUST00000097146 517 ntBASIC15.31■□□□□ 0.04
Pfdn6Q03958 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn6Q03958 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Gm43347-201ENSMUST00000200226 580 ntBASIC15.3■□□□□ 0.04
Pfdn6Q03958 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.3■□□□□ 0.04
Pfdn6Q03958 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.3■□□□□ 0.04
Pfdn6Q03958 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn6Q03958 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn6Q03958 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn6Q03958 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn6Q03958 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn6Q03958 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn6Q03958 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn6Q03958 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pfdn6Q03958 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn6Q03958 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn6Q03958 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn6Q03958 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Pfdn6Q03958 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms