Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GabpaQ00422 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GabpaQ00422 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GabpaQ00422 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GabpaQ00422 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GabpaQ00422 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.26■□□□□ 0.35
GabpaQ00422 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GabpaQ00422 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GabpaQ00422 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
GabpaQ00422 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.26■□□□□ 0.35
GabpaQ00422 Gm16026-204ENSMUST00000162652 683 ntBASIC17.26■□□□□ 0.35
GabpaQ00422 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GabpaQ00422 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.26■□□□□ 0.35
GabpaQ00422 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.26■□□□□ 0.35
GabpaQ00422 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GabpaQ00422 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GabpaQ00422 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
GabpaQ00422 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GabpaQ00422 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GabpaQ00422 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GabpaQ00422 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GabpaQ00422 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GabpaQ00422 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
GabpaQ00422 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GabpaQ00422 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
GabpaQ00422 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.26■□□□□ 0.35
GabpaQ00422 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
GabpaQ00422 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
GabpaQ00422 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Gm25948-201ENSMUST00000175334 112 ntBASIC17.25■□□□□ 0.35
GabpaQ00422 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.25■□□□□ 0.35
GabpaQ00422 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.25■□□□□ 0.35
GabpaQ00422 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
GabpaQ00422 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
GabpaQ00422 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GabpaQ00422 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
GabpaQ00422 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
GabpaQ00422 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GabpaQ00422 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.24■□□□□ 0.35
GabpaQ00422 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.24■□□□□ 0.35
GabpaQ00422 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.24■□□□□ 0.35
GabpaQ00422 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.24■□□□□ 0.35
GabpaQ00422 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
GabpaQ00422 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GabpaQ00422 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GabpaQ00422 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GabpaQ00422 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
GabpaQ00422 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
GabpaQ00422 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GabpaQ00422 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GabpaQ00422 Mir449b-201ENSMUST00000104833 80 ntBASIC17.24■□□□□ 0.35
GabpaQ00422 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GabpaQ00422 Gm6973-201ENSMUST00000117080 721 ntBASIC17.24■□□□□ 0.35
GabpaQ00422 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GabpaQ00422 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GabpaQ00422 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GabpaQ00422 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GabpaQ00422 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GabpaQ00422 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GabpaQ00422 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GabpaQ00422 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
GabpaQ00422 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GabpaQ00422 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
GabpaQ00422 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GabpaQ00422 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.23■□□□□ 0.35
GabpaQ00422 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GabpaQ00422 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GabpaQ00422 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GabpaQ00422 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GabpaQ00422 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GabpaQ00422 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
GabpaQ00422 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.23■□□□□ 0.35
GabpaQ00422 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GabpaQ00422 Gm25287-201ENSMUST00000103846 110 ntBASIC17.23■□□□□ 0.35
GabpaQ00422 Gm22918-201ENSMUST00000103855 110 ntBASIC17.23■□□□□ 0.35
GabpaQ00422 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
GabpaQ00422 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.23■□□□□ 0.35
GabpaQ00422 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GabpaQ00422 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.23■□□□□ 0.35
GabpaQ00422 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms