Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Gm11594-201ENSMUST00000122313 162 ntBASIC14.41□□□□□ -0.1
Nkx3-2P97503 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Gm45167-201ENSMUST00000208007 322 ntBASIC14.41□□□□□ -0.1
Nkx3-2P97503 Gm10175-201ENSMUST00000086013 645 ntBASIC14.41□□□□□ -0.1
Nkx3-2P97503 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.41□□□□□ -0.1
Nkx3-2P97503 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx3-2P97503 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Gm4899-201ENSMUST00000178708 719 ntBASIC14.4□□□□□ -0.1
Nkx3-2P97503 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Nkx3-2P97503 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.4□□□□□ -0.1
Nkx3-2P97503 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-2P97503 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.4□□□□□ -0.1
Nkx3-2P97503 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Nkx3-2P97503 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Mir3113-201ENSMUST00000175478 76 ntBASIC14.39□□□□□ -0.11
Nkx3-2P97503 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.39□□□□□ -0.11
Nkx3-2P97503 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.39□□□□□ -0.11
Nkx3-2P97503 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms