Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Npas1P97459 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Npas1P97459 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.82□□□□□ -0.36
Npas1P97459 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Npas1P97459 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Npas1P97459 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Npas1P97459 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Npas1P97459 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.82□□□□□ -0.36
Npas1P97459 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.82□□□□□ -0.36
Npas1P97459 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Npas1P97459 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Npas1P97459 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.81□□□□□ -0.36
Npas1P97459 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Npas1P97459 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.81□□□□□ -0.36
Npas1P97459 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.81□□□□□ -0.36
Npas1P97459 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Npas1P97459 Gm8520-201ENSMUST00000186517 868 ntBASIC12.81□□□□□ -0.36
Npas1P97459 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.81□□□□□ -0.36
Npas1P97459 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Npas1P97459 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.81□□□□□ -0.36
Npas1P97459 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Npas1P97459 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.81□□□□□ -0.36
Npas1P97459 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Npas1P97459 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Npas1P97459 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.8□□□□□ -0.36
Npas1P97459 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.8□□□□□ -0.36
Npas1P97459 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.8□□□□□ -0.36
Npas1P97459 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Npas1P97459 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Gm16061-201ENSMUST00000122167 857 ntBASIC12.8□□□□□ -0.36
Npas1P97459 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.8□□□□□ -0.36
Npas1P97459 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
Npas1P97459 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npas1P97459 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms