Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SgcaP82350 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.81□□□□□ -0.36
SgcaP82350 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SgcaP82350 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.81□□□□□ -0.36
SgcaP82350 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SgcaP82350 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.8□□□□□ -0.36
SgcaP82350 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SgcaP82350 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SgcaP82350 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SgcaP82350 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
SgcaP82350 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SgcaP82350 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
SgcaP82350 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.8□□□□□ -0.36
SgcaP82350 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SgcaP82350 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgcaP82350 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SgcaP82350 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
SgcaP82350 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.79□□□□□ -0.36
SgcaP82350 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
SgcaP82350 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.79□□□□□ -0.36
SgcaP82350 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Gm715-201ENSMUST00000117865 831 ntBASIC12.79□□□□□ -0.36
SgcaP82350 Gm12134-201ENSMUST00000122109 520 ntBASIC12.79□□□□□ -0.36
SgcaP82350 Gm13474-201ENSMUST00000122466 815 ntBASIC12.79□□□□□ -0.36
SgcaP82350 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.79□□□□□ -0.36
SgcaP82350 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.79□□□□□ -0.36
SgcaP82350 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
SgcaP82350 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SgcaP82350 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SgcaP82350 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.79□□□□□ -0.36
SgcaP82350 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SgcaP82350 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.78□□□□□ -0.36
SgcaP82350 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.78□□□□□ -0.36
SgcaP82350 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SgcaP82350 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SgcaP82350 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
SgcaP82350 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SgcaP82350 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.78□□□□□ -0.36
SgcaP82350 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SgcaP82350 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms