Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.22□□□□□ -0.29
Atf1P81269 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Atf1P81269 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Atf1P81269 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.22□□□□□ -0.29
Atf1P81269 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Atf1P81269 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atf1P81269 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Atf1P81269 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Atf1P81269 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atf1P81269 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atf1P81269 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.21□□□□□ -0.29
Atf1P81269 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atf1P81269 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atf1P81269 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Atf1P81269 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Atf1P81269 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atf1P81269 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atf1P81269 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atf1P81269 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Atf1P81269 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Atf1P81269 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atf1P81269 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Atf1P81269 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Atf1P81269 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.21□□□□□ -0.29
Atf1P81269 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Atf1P81269 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atf1P81269 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atf1P81269 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atf1P81269 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atf1P81269 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atf1P81269 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Atf1P81269 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atf1P81269 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.21□□□□□ -0.3
Atf1P81269 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Atf1P81269 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf1P81269 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf1P81269 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Atf1P81269 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf1P81269 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Atf1P81269 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Atf1P81269 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Atf1P81269 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf1P81269 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Atf1P81269 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Atf1P81269 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Atf1P81269 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.2□□□□□ -0.3
Atf1P81269 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Atf1P81269 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Atf1P81269 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.2□□□□□ -0.3
Atf1P81269 Gm18669-201ENSMUST00000216049 778 ntBASIC13.2□□□□□ -0.3
Atf1P81269 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.2□□□□□ -0.3
Atf1P81269 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf1P81269 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf1P81269 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf1P81269 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf1P81269 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf1P81269 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Atf1P81269 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf1P81269 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Atf1P81269 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atf1P81269 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Atf1P81269 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf1P81269 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Atf1P81269 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf1P81269 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf1P81269 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Atf1P81269 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Atf1P81269 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Atf1P81269 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Atf1P81269 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.19□□□□□ -0.3
Atf1P81269 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf1P81269 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf1P81269 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Atf1P81269 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf1P81269 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf1P81269 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf1P81269 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf1P81269 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.19□□□□□ -0.3
Atf1P81269 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.19□□□□□ -0.3
Atf1P81269 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Atf1P81269 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Atf1P81269 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Atf1P81269 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Atf1P81269 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms