Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp9xP70398 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usp9xP70398 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp9xP70398 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usp9xP70398 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp9xP70398 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp9xP70398 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp9xP70398 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp9xP70398 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.56□□□□□ -0.4
Usp9xP70398 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp9xP70398 Gm3436-201ENSMUST00000179930 840 ntBASIC12.56□□□□□ -0.4
Usp9xP70398 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.56□□□□□ -0.4
Usp9xP70398 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.56□□□□□ -0.4
Usp9xP70398 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp9xP70398 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Usp9xP70398 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp9xP70398 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp9xP70398 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Usp9xP70398 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp9xP70398 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp9xP70398 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp9xP70398 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp9xP70398 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp9xP70398 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp9xP70398 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp9xP70398 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp9xP70398 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Usp9xP70398 Gm15198-201ENSMUST00000117283 177 ntBASIC12.55□□□□□ -0.4
Usp9xP70398 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.55□□□□□ -0.4
Usp9xP70398 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.55□□□□□ -0.4
Usp9xP70398 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp9xP70398 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp9xP70398 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp9xP70398 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp9xP70398 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp9xP70398 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp9xP70398 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Usp9xP70398 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Usp9xP70398 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Usp9xP70398 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.55□□□□□ -0.4
Usp9xP70398 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.55□□□□□ -0.4
Usp9xP70398 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.55□□□□□ -0.4
Usp9xP70398 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp9xP70398 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp9xP70398 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.55□□□□□ -0.4
Usp9xP70398 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp9xP70398 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp9xP70398 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.55□□□□□ -0.4
Usp9xP70398 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.54□□□□□ -0.4
Usp9xP70398 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usp9xP70398 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usp9xP70398 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp9xP70398 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp9xP70398 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp9xP70398 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.54□□□□□ -0.4
Usp9xP70398 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Usp9xP70398 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp9xP70398 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usp9xP70398 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.54□□□□□ -0.4
Usp9xP70398 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 Mir3547-201ENSMUST00000175461 88 ntBASIC12.54□□□□□ -0.4
Usp9xP70398 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Usp9xP70398 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp9xP70398 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
Usp9xP70398 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.53□□□□□ -0.4
Usp9xP70398 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC12.53□□□□□ -0.4
Usp9xP70398 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.53□□□□□ -0.4
Usp9xP70398 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.53□□□□□ -0.4
Usp9xP70398 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.53□□□□□ -0.4
Usp9xP70398 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.53□□□□□ -0.4
Usp9xP70398 Gm18624-201ENSMUST00000220966 658 ntBASIC12.53□□□□□ -0.4
Usp9xP70398 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.53□□□□□ -0.4
Usp9xP70398 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp9xP70398 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms