Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pdlim4P70271 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Pdlim4P70271 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Pdlim4P70271 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Pdlim4P70271 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pdlim4P70271 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Pdlim4P70271 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.7□□□□□ -0.38
Pdlim4P70271 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Gm7222-201ENSMUST00000117512 906 ntBASIC12.7□□□□□ -0.38
Pdlim4P70271 Gm15358-201ENSMUST00000119249 520 ntBASIC12.7□□□□□ -0.38
Pdlim4P70271 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.7□□□□□ -0.38
Pdlim4P70271 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.7□□□□□ -0.38
Pdlim4P70271 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Gm27646-201ENSMUST00000183989 110 ntBASIC12.7□□□□□ -0.38
Pdlim4P70271 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.7□□□□□ -0.38
Pdlim4P70271 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim4P70271 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Pdlim4P70271 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pdlim4P70271 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.69□□□□□ -0.38
Pdlim4P70271 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.69□□□□□ -0.38
Pdlim4P70271 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pdlim4P70271 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.69□□□□□ -0.38
Pdlim4P70271 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.69□□□□□ -0.38
Pdlim4P70271 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.69□□□□□ -0.38
Pdlim4P70271 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pdlim4P70271 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim4P70271 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim4P70271 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim4P70271 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim4P70271 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pdlim4P70271 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim4P70271 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim4P70271 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim4P70271 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.68□□□□□ -0.38
Pdlim4P70271 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim4P70271 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim4P70271 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim4P70271 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.68□□□□□ -0.38
Pdlim4P70271 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.68□□□□□ -0.38
Pdlim4P70271 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.68□□□□□ -0.38
Pdlim4P70271 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim4P70271 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim4P70271 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.68□□□□□ -0.38
Pdlim4P70271 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.68□□□□□ -0.38
Pdlim4P70271 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Pdlim4P70271 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.68□□□□□ -0.38
Pdlim4P70271 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim4P70271 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim4P70271 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim4P70271 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim4P70271 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pdlim4P70271 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms