Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.46□□□□□ -0.25
Sec61a1P61620 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sec61a1P61620 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sec61a1P61620 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sec61a1P61620 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Sec61a1P61620 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Sec61a1P61620 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Sec61a1P61620 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Sec61a1P61620 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sec61a1P61620 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sec61a1P61620 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Sec61a1P61620 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.45□□□□□ -0.26
Sec61a1P61620 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sec61a1P61620 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.45□□□□□ -0.26
Sec61a1P61620 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sec61a1P61620 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Sec61a1P61620 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.45□□□□□ -0.26
Sec61a1P61620 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.45□□□□□ -0.26
Sec61a1P61620 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sec61a1P61620 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Sec61a1P61620 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Sec61a1P61620 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Sec61a1P61620 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Sec61a1P61620 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.44□□□□□ -0.26
Sec61a1P61620 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Sec61a1P61620 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
Sec61a1P61620 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.44□□□□□ -0.26
Sec61a1P61620 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.44□□□□□ -0.26
Sec61a1P61620 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Sec61a1P61620 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sec61a1P61620 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sec61a1P61620 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sec61a1P61620 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sec61a1P61620 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.43□□□□□ -0.26
Sec61a1P61620 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sec61a1P61620 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.43□□□□□ -0.26
Sec61a1P61620 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms