Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3b6P59708 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3b6P59708 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3b6P59708 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Sf3b6P59708 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3b6P59708 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3b6P59708 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3b6P59708 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3b6P59708 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.54□□□□□ -0.24
Sf3b6P59708 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3b6P59708 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3b6P59708 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.54□□□□□ -0.24
Sf3b6P59708 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.54□□□□□ -0.24
Sf3b6P59708 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3b6P59708 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3b6P59708 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sf3b6P59708 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Sf3b6P59708 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3b6P59708 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.54□□□□□ -0.24
Sf3b6P59708 Gm6345-202ENSMUST00000180900 204 ntBASIC13.54□□□□□ -0.24
Sf3b6P59708 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3b6P59708 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.54□□□□□ -0.24
Sf3b6P59708 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.54□□□□□ -0.24
Sf3b6P59708 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.54□□□□□ -0.24
Sf3b6P59708 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sf3b6P59708 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sf3b6P59708 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3b6P59708 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3b6P59708 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sf3b6P59708 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Sf3b6P59708 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3b6P59708 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3b6P59708 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3b6P59708 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sf3b6P59708 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sf3b6P59708 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sf3b6P59708 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.53□□□□□ -0.24
Sf3b6P59708 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.53□□□□□ -0.24
Sf3b6P59708 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.53□□□□□ -0.24
Sf3b6P59708 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.53□□□□□ -0.24
Sf3b6P59708 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.53□□□□□ -0.24
Sf3b6P59708 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.53□□□□□ -0.24
Sf3b6P59708 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Sf3b6P59708 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3b6P59708 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sf3b6P59708 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.52□□□□□ -0.24
Sf3b6P59708 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3b6P59708 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3b6P59708 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3b6P59708 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Sf3b6P59708 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3b6P59708 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3b6P59708 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3b6P59708 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3b6P59708 Carlr-201ENSMUST00000181515 2574 ntBASIC13.52□□□□□ -0.24
Sf3b6P59708 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3b6P59708 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3b6P59708 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Sf3b6P59708 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3b6P59708 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3b6P59708 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3b6P59708 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3b6P59708 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3b6P59708 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sf3b6P59708 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3b6P59708 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sf3b6P59708 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Sf3b6P59708 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3b6P59708 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3b6P59708 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.52□□□□□ -0.25
Sf3b6P59708 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.52□□□□□ -0.25
Sf3b6P59708 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sf3b6P59708 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Sf3b6P59708 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3b6P59708 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3b6P59708 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3b6P59708 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Sf3b6P59708 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3b6P59708 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sf3b6P59708 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms