Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Nup43P59235 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.4□□□□□ -0.1
Nup43P59235 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.4□□□□□ -0.1
Nup43P59235 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.4□□□□□ -0.1
Nup43P59235 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.4□□□□□ -0.1
Nup43P59235 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.4□□□□□ -0.1
Nup43P59235 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.4□□□□□ -0.1
Nup43P59235 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.4□□□□□ -0.1
Nup43P59235 Gm44771-201ENSMUST00000206975 626 ntBASIC14.4□□□□□ -0.1
Nup43P59235 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nup43P59235 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Nup43P59235 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.4□□□□□ -0.1
Nup43P59235 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.4□□□□□ -0.1
Nup43P59235 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup43P59235 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Nup43P59235 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Nup43P59235 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup43P59235 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nup43P59235 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup43P59235 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup43P59235 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup43P59235 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup43P59235 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup43P59235 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup43P59235 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.39□□□□□ -0.11
Nup43P59235 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.39□□□□□ -0.11
Nup43P59235 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nup43P59235 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.39□□□□□ -0.11
Nup43P59235 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nup43P59235 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.39□□□□□ -0.11
Nup43P59235 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.39□□□□□ -0.11
Nup43P59235 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup43P59235 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nup43P59235 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nup43P59235 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nup43P59235 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup43P59235 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup43P59235 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nup43P59235 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.39□□□□□ -0.11
Nup43P59235 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup43P59235 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup43P59235 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup43P59235 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup43P59235 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup43P59235 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup43P59235 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup43P59235 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup43P59235 Gm1401-201ENSMUST00000122048 772 ntBASIC14.38□□□□□ -0.11
Nup43P59235 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup43P59235 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.38□□□□□ -0.11
Nup43P59235 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.38□□□□□ -0.11
Nup43P59235 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.38□□□□□ -0.11
Nup43P59235 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.38□□□□□ -0.11
Nup43P59235 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup43P59235 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Nup43P59235 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup43P59235 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup43P59235 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.38□□□□□ -0.11
Nup43P59235 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.38□□□□□ -0.11
Nup43P59235 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup43P59235 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup43P59235 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.38□□□□□ -0.11
Nup43P59235 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nup43P59235 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup43P59235 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nup43P59235 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.37□□□□□ -0.11
Nup43P59235 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup43P59235 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.37□□□□□ -0.11
Nup43P59235 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.37□□□□□ -0.11
Nup43P59235 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.37□□□□□ -0.11
Nup43P59235 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms