Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Rab4aP56371 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.07□□□□□ -0.48
Rab4aP56371 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rab4aP56371 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rab4aP56371 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Rab4aP56371 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.07□□□□□ -0.48
Rab4aP56371 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.06□□□□□ -0.48
Rab4aP56371 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rab4aP56371 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rab4aP56371 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.06□□□□□ -0.48
Rab4aP56371 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Rab4aP56371 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.06□□□□□ -0.48
Rab4aP56371 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.06□□□□□ -0.48
Rab4aP56371 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.06□□□□□ -0.48
Rab4aP56371 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rab4aP56371 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rab4aP56371 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rab4aP56371 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Rab4aP56371 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab4aP56371 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Rab4aP56371 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rab4aP56371 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Rab4aP56371 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rab4aP56371 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Rab4aP56371 Gm24841-201ENSMUST00000158676 357 ntBASIC12.05□□□□□ -0.48
Rab4aP56371 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Rab4aP56371 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.05□□□□□ -0.48
Rab4aP56371 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Rab4aP56371 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab4aP56371 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab4aP56371 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab4aP56371 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab4aP56371 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rab4aP56371 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rab4aP56371 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rab4aP56371 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rab4aP56371 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Rab4aP56371 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab4aP56371 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab4aP56371 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab4aP56371 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rab4aP56371 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab4aP56371 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.04□□□□□ -0.48
Rab4aP56371 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab4aP56371 Gm17661-201ENSMUST00000170317 270 ntBASIC12.04□□□□□ -0.48
Rab4aP56371 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rab4aP56371 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.04□□□□□ -0.48
Rab4aP56371 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab4aP56371 Gm4968-201ENSMUST00000071458 858 ntBASIC12.04□□□□□ -0.48
Rab4aP56371 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab4aP56371 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rab4aP56371 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Rab4aP56371 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab4aP56371 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms