Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.08■□□□□ 0
Pdx1P52946 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pdx1P52946 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdx1P52946 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdx1P52946 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pdx1P52946 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pdx1P52946 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pdx1P52946 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pdx1P52946 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pdx1P52946 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdx1P52946 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdx1P52946 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pdx1P52946 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdx1P52946 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pdx1P52946 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdx1P52946 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdx1P52946 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdx1P52946 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Pdx1P52946 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pdx1P52946 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pdx1P52946 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdx1P52946 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pdx1P52946 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.07■□□□□ 0
Pdx1P52946 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.07■□□□□ 0
Pdx1P52946 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.07■□□□□ 0
Pdx1P52946 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pdx1P52946 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.07■□□□□ 0
Pdx1P52946 Gm7787-201ENSMUST00000216858 688 ntBASIC15.07■□□□□ 0
Pdx1P52946 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pdx1P52946 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.07■□□□□ 0
Pdx1P52946 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdx1P52946 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
Pdx1P52946 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdx1P52946 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdx1P52946 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pdx1P52946 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdx1P52946 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pdx1P52946 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pdx1P52946 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Pdx1P52946 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Pdx1P52946 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.06■□□□□ 0
Pdx1P52946 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pdx1P52946 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.06■□□□□ 0
Pdx1P52946 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.06■□□□□ 0
Pdx1P52946 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.06■□□□□ 0
Pdx1P52946 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.06■□□□□ 0
Pdx1P52946 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdx1P52946 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Pdx1P52946 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.05■□□□□ 0
Pdx1P52946 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Pdx1P52946 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Pdx1P52946 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.05■□□□□ -0
Pdx1P52946 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.05■□□□□ -0
Pdx1P52946 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.05■□□□□ -0
Pdx1P52946 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.05■□□□□ -0
Pdx1P52946 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.05■□□□□ -0
Pdx1P52946 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.05■□□□□ -0
Pdx1P52946 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Pdx1P52946 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdx1P52946 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms