Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atoh1P48985 Gm5566-201ENSMUST00000116118 459 ntBASIC17.14■□□□□ 0.33
Atoh1P48985 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.14■□□□□ 0.33
Atoh1P48985 Gm9719-201ENSMUST00000162765 543 ntBASIC17.14■□□□□ 0.33
Atoh1P48985 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atoh1P48985 Gm6745-201ENSMUST00000199216 526 ntBASIC17.14■□□□□ 0.33
Atoh1P48985 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atoh1P48985 Shd-206ENSMUST00000225145 998 ntBASIC17.14■□□□□ 0.33
Atoh1P48985 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.14■□□□□ 0.33
Atoh1P48985 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atoh1P48985 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atoh1P48985 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atoh1P48985 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atoh1P48985 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atoh1P48985 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atoh1P48985 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.14■□□□□ 0.33
Atoh1P48985 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atoh1P48985 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atoh1P48985 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atoh1P48985 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atoh1P48985 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atoh1P48985 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atoh1P48985 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atoh1P48985 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atoh1P48985 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atoh1P48985 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atoh1P48985 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atoh1P48985 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.13■□□□□ 0.33
Atoh1P48985 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Atoh1P48985 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Atoh1P48985 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC17.13■□□□□ 0.33
Atoh1P48985 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.13■□□□□ 0.33
Atoh1P48985 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atoh1P48985 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.13■□□□□ 0.33
Atoh1P48985 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atoh1P48985 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC17.13■□□□□ 0.33
Atoh1P48985 Gm25857-201ENSMUST00000082788 129 ntBASIC17.13■□□□□ 0.33
Atoh1P48985 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC17.13■□□□□ 0.33
Atoh1P48985 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atoh1P48985 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atoh1P48985 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atoh1P48985 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atoh1P48985 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atoh1P48985 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atoh1P48985 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atoh1P48985 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atoh1P48985 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.12■□□□□ 0.33
Atoh1P48985 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.12■□□□□ 0.33
Atoh1P48985 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.12■□□□□ 0.33
Atoh1P48985 Gm23984-201ENSMUST00000157139 203 ntBASIC17.12■□□□□ 0.33
Atoh1P48985 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.12■□□□□ 0.33
Atoh1P48985 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Atoh1P48985 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atoh1P48985 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
Atoh1P48985 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.12■□□□□ 0.33
Atoh1P48985 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atoh1P48985 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atoh1P48985 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Atoh1P48985 Asic1-205ENSMUST00000228185 1818 ntBASIC17.12■□□□□ 0.33
Atoh1P48985 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atoh1P48985 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Atoh1P48985 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atoh1P48985 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atoh1P48985 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atoh1P48985 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atoh1P48985 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.11■□□□□ 0.33
Atoh1P48985 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atoh1P48985 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atoh1P48985 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atoh1P48985 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.11■□□□□ 0.33
Atoh1P48985 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atoh1P48985 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.11■□□□□ 0.33
Atoh1P48985 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atoh1P48985 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Atoh1P48985 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atoh1P48985 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atoh1P48985 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atoh1P48985 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atoh1P48985 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atoh1P48985 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atoh1P48985 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Atoh1P48985 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.1■□□□□ 0.33
Atoh1P48985 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atoh1P48985 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atoh1P48985 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.1■□□□□ 0.33
Atoh1P48985 Gm8515-201ENSMUST00000194852 576 ntBASIC17.1■□□□□ 0.33
Atoh1P48985 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.1■□□□□ 0.33
Atoh1P48985 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atoh1P48985 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC17.1■□□□□ 0.33
Atoh1P48985 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atoh1P48985 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atoh1P48985 Gm6180-201ENSMUST00000065243 498 ntBASIC17.1■□□□□ 0.33
Atoh1P48985 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atoh1P48985 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Atoh1P48985 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.1■□□□□ 0.33
Atoh1P48985 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atoh1P48985 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atoh1P48985 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atoh1P48985 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atoh1P48985 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms