Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptx3P48759 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptx3P48759 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ptx3P48759 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.17□□□□□ -0.14
Ptx3P48759 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptx3P48759 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ptx3P48759 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.17□□□□□ -0.14
Ptx3P48759 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.17□□□□□ -0.14
Ptx3P48759 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.17□□□□□ -0.14
Ptx3P48759 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptx3P48759 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptx3P48759 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ptx3P48759 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptx3P48759 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ptx3P48759 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.17□□□□□ -0.14
Ptx3P48759 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptx3P48759 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptx3P48759 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ptx3P48759 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptx3P48759 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ptx3P48759 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptx3P48759 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptx3P48759 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptx3P48759 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ptx3P48759 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.16□□□□□ -0.14
Ptx3P48759 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ptx3P48759 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptx3P48759 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptx3P48759 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.16□□□□□ -0.14
Ptx3P48759 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptx3P48759 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ptx3P48759 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.16□□□□□ -0.14
Ptx3P48759 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.16□□□□□ -0.14
Ptx3P48759 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptx3P48759 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptx3P48759 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ptx3P48759 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptx3P48759 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ptx3P48759 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ptx3P48759 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptx3P48759 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptx3P48759 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Ptx3P48759 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Ptx3P48759 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptx3P48759 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptx3P48759 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.15□□□□□ -0.14
Ptx3P48759 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptx3P48759 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptx3P48759 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.15□□□□□ -0.14
Ptx3P48759 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptx3P48759 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptx3P48759 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptx3P48759 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.15□□□□□ -0.14
Ptx3P48759 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.15□□□□□ -0.14
Ptx3P48759 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Ptx3P48759 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptx3P48759 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.15□□□□□ -0.14
Ptx3P48759 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.15□□□□□ -0.14
Ptx3P48759 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptx3P48759 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Ptx3P48759 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptx3P48759 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptx3P48759 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ptx3P48759 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptx3P48759 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptx3P48759 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptx3P48759 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptx3P48759 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptx3P48759 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ptx3P48759 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ptx3P48759 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ptx3P48759 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.14□□□□□ -0.15
Ptx3P48759 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Ptx3P48759 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ptx3P48759 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.14□□□□□ -0.15
Ptx3P48759 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.14□□□□□ -0.15
Ptx3P48759 Gm18246-201ENSMUST00000221023 728 ntBASIC14.14□□□□□ -0.15
Ptx3P48759 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ptx3P48759 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Ptx3P48759 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ptx3P48759 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms