Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Sox2P48432 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.32□□□□□ -0.12
Sox2P48432 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sox2P48432 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sox2P48432 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sox2P48432 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Sox2P48432 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Sox2P48432 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sox2P48432 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Sox2P48432 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sox2P48432 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sox2P48432 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sox2P48432 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Sox2P48432 Gm15565-201ENSMUST00000118890 427 ntBASIC14.31□□□□□ -0.12
Sox2P48432 Gm25406-201ENSMUST00000157599 105 ntBASIC14.31□□□□□ -0.12
Sox2P48432 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Sox2P48432 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.31□□□□□ -0.12
Sox2P48432 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.31□□□□□ -0.12
Sox2P48432 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.31□□□□□ -0.12
Sox2P48432 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox2P48432 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox2P48432 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.3□□□□□ -0.12
Sox2P48432 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.3□□□□□ -0.12
Sox2P48432 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.3□□□□□ -0.12
Sox2P48432 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sox2P48432 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.3□□□□□ -0.12
Sox2P48432 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.3□□□□□ -0.12
Sox2P48432 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.3□□□□□ -0.12
Sox2P48432 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sox2P48432 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sox2P48432 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox2P48432 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sox2P48432 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox2P48432 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Sox2P48432 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sox2P48432 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.29□□□□□ -0.12
Sox2P48432 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox2P48432 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Gm18032-201ENSMUST00000222541 538 ntBASIC14.29□□□□□ -0.12
Sox2P48432 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.29□□□□□ -0.12
Sox2P48432 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Sox2P48432 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox2P48432 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms