Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Gm6415-201ENSMUST00000118488 348 ntBASIC14.6□□□□□ -0.07
Sox18P43680 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Sox18P43680 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC14.6□□□□□ -0.07
Sox18P43680 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.6□□□□□ -0.07
Sox18P43680 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.6□□□□□ -0.07
Sox18P43680 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Sox18P43680 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Sox18P43680 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Sox18P43680 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Sox18P43680 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox18P43680 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.59□□□□□ -0.07
Sox18P43680 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.59□□□□□ -0.07
Sox18P43680 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.59□□□□□ -0.07
Sox18P43680 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC14.59□□□□□ -0.07
Sox18P43680 Gm38294-201ENSMUST00000192831 381 ntBASIC14.59□□□□□ -0.07
Sox18P43680 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.59□□□□□ -0.07
Sox18P43680 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Sox18P43680 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox18P43680 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Sox18P43680 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sox18P43680 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sox18P43680 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sox18P43680 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.58□□□□□ -0.07
Sox18P43680 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Sox18P43680 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.58□□□□□ -0.07
Sox18P43680 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.58□□□□□ -0.08
Sox18P43680 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Sox18P43680 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.58□□□□□ -0.08
Sox18P43680 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 CT009764.1-201ENSMUST00000222260 483 ntBASIC14.58□□□□□ -0.08
Sox18P43680 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.58□□□□□ -0.08
Sox18P43680 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Sox18P43680 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.58□□□□□ -0.08
Sox18P43680 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sox18P43680 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sox18P43680 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sox18P43680 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox18P43680 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox18P43680 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox18P43680 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Sox18P43680 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.57□□□□□ -0.08
Sox18P43680 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.57□□□□□ -0.08
Sox18P43680 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox18P43680 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox18P43680 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox18P43680 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms