Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 Gm27839-201ENSMUST00000184242 106 ntBASIC16.05■□□□□ 0.16
HttP42859 AA619741-201ENSMUST00000195095 646 ntBASIC16.05■□□□□ 0.16
HttP42859 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
HttP42859 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.05■□□□□ 0.16
HttP42859 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.04■□□□□ 0.16
HttP42859 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
HttP42859 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.04■□□□□ 0.16
HttP42859 Gm5187-201ENSMUST00000117317 991 ntBASIC16.04■□□□□ 0.16
HttP42859 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.04■□□□□ 0.16
HttP42859 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.04■□□□□ 0.16
HttP42859 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HttP42859 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HttP42859 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HttP42859 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC16.04■□□□□ 0.16
HttP42859 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Gm5356-201ENSMUST00000093326 615 ntBASIC16.04■□□□□ 0.16
HttP42859 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HttP42859 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HttP42859 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.03■□□□□ 0.16
HttP42859 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
HttP42859 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HttP42859 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HttP42859 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC16.03■□□□□ 0.16
HttP42859 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.03■□□□□ 0.16
HttP42859 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.03■□□□□ 0.16
HttP42859 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Gm45453-201ENSMUST00000211758 853 ntBASIC16.03■□□□□ 0.16
HttP42859 Gm19220-201ENSMUST00000222682 803 ntBASIC16.03■□□□□ 0.16
HttP42859 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.03■□□□□ 0.16
HttP42859 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HttP42859 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HttP42859 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HttP42859 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.02■□□□□ 0.16
HttP42859 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.02■□□□□ 0.16
HttP42859 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
HttP42859 Gm5354-201ENSMUST00000182417 973 ntBASIC16.02■□□□□ 0.16
HttP42859 Mir8109-201ENSMUST00000184375 117 ntBASIC16.02■□□□□ 0.16
HttP42859 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HttP42859 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
HttP42859 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HttP42859 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HttP42859 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HttP42859 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HttP42859 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HttP42859 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
HttP42859 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
HttP42859 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.02■□□□□ 0.15
HttP42859 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
HttP42859 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
HttP42859 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HttP42859 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
HttP42859 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
HttP42859 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HttP42859 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
HttP42859 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HttP42859 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HttP42859 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
HttP42859 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HttP42859 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HttP42859 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.01■□□□□ 0.15
HttP42859 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HttP42859 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC16.01■□□□□ 0.15
HttP42859 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.01■□□□□ 0.15
HttP42859 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.01■□□□□ 0.15
HttP42859 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HttP42859 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms