Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Nkx1-2P42580 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Gm43205-201ENSMUST00000198622 1968 ntBASIC18.78■□□□□ 0.6
Nkx1-2P42580 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-2P42580 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-2P42580 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-2P42580 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-2P42580 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-2P42580 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-2P42580 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-2P42580 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-2P42580 Gm12497-201ENSMUST00000138778 237 ntBASIC18.77■□□□□ 0.6
Nkx1-2P42580 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.77■□□□□ 0.6
Nkx1-2P42580 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.77■□□□□ 0.6
Nkx1-2P42580 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nkx1-2P42580 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-2P42580 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Nkx1-2P42580 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-2P42580 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-2P42580 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-2P42580 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-2P42580 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx1-2P42580 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx1-2P42580 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx1-2P42580 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx1-2P42580 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx1-2P42580 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Gm14722-201ENSMUST00000118943 689 ntBASIC18.76■□□□□ 0.59
Nkx1-2P42580 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Gm19164-201ENSMUST00000210667 640 ntBASIC18.76■□□□□ 0.59
Nkx1-2P42580 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.76■□□□□ 0.59
Nkx1-2P42580 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-2P42580 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-2P42580 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.75■□□□□ 0.59
Nkx1-2P42580 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-2P42580 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-2P42580 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Nkx1-2P42580 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-2P42580 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nkx1-2P42580 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nkx1-2P42580 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-2P42580 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-2P42580 Gm14859-201ENSMUST00000117752 357 ntBASIC18.74■□□□□ 0.59
Nkx1-2P42580 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Nkx1-2P42580 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.74■□□□□ 0.59
Nkx1-2P42580 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-2P42580 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.74■□□□□ 0.59
Nkx1-2P42580 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-2P42580 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nkx1-2P42580 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx1-2P42580 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms