Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Abca1P41233 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.69□□□□□ -0.38
Abca1P41233 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Abca1P41233 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Abca1P41233 Mir7023-201ENSMUST00000185093 64 ntBASIC12.69□□□□□ -0.38
Abca1P41233 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.69□□□□□ -0.38
Abca1P41233 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Abca1P41233 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.69□□□□□ -0.38
Abca1P41233 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.69□□□□□ -0.38
Abca1P41233 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Abca1P41233 Gm15427-201ENSMUST00000117288 531 ntBASIC12.69□□□□□ -0.38
Abca1P41233 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.69□□□□□ -0.38
Abca1P41233 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.69□□□□□ -0.38
Abca1P41233 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.69□□□□□ -0.38
Abca1P41233 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.69□□□□□ -0.38
Abca1P41233 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.69□□□□□ -0.38
Abca1P41233 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.69□□□□□ -0.38
Abca1P41233 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Abca1P41233 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Abca1P41233 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Abca1P41233 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Abca1P41233 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Abca1P41233 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.68□□□□□ -0.38
Abca1P41233 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Abca1P41233 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.68□□□□□ -0.38
Abca1P41233 Gm45612-201ENSMUST00000211320 160 ntBASIC12.68□□□□□ -0.38
Abca1P41233 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Abca1P41233 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.68□□□□□ -0.38
Abca1P41233 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Abca1P41233 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.68□□□□□ -0.38
Abca1P41233 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.68□□□□□ -0.38
Abca1P41233 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Abca1P41233 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.68□□□□□ -0.38
Abca1P41233 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.68□□□□□ -0.38
Abca1P41233 Mir6990-201ENSMUST00000183724 91 ntBASIC12.68□□□□□ -0.38
Abca1P41233 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.68□□□□□ -0.38
Abca1P41233 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Abca1P41233 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.68□□□□□ -0.38
Abca1P41233 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Abca1P41233 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Abca1P41233 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Abca1P41233 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Abca1P41233 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.67□□□□□ -0.38
Abca1P41233 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Abca1P41233 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Abca1P41233 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Abca1P41233 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Abca1P41233 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.67□□□□□ -0.38
Abca1P41233 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Abca1P41233 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Abca1P41233 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms