Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VhlP40338 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.52□□□□□ -0.4
VhlP40338 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VhlP40338 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VhlP40338 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
VhlP40338 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VhlP40338 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VhlP40338 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
VhlP40338 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VhlP40338 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VhlP40338 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.52□□□□□ -0.41
VhlP40338 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.52□□□□□ -0.41
VhlP40338 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.52□□□□□ -0.41
VhlP40338 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.52□□□□□ -0.41
VhlP40338 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.52□□□□□ -0.41
VhlP40338 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.52□□□□□ -0.41
VhlP40338 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.52□□□□□ -0.41
VhlP40338 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.52□□□□□ -0.41
VhlP40338 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.52□□□□□ -0.41
VhlP40338 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.52□□□□□ -0.41
VhlP40338 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.52□□□□□ -0.41
VhlP40338 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.52□□□□□ -0.41
VhlP40338 Gm8825-201ENSMUST00000182565 998 ntBASIC12.52□□□□□ -0.41
VhlP40338 Gm4518-201ENSMUST00000182638 718 ntBASIC12.52□□□□□ -0.41
VhlP40338 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.52□□□□□ -0.41
VhlP40338 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.52□□□□□ -0.41
VhlP40338 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.52□□□□□ -0.41
VhlP40338 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.52□□□□□ -0.41
VhlP40338 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.52□□□□□ -0.41
VhlP40338 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
VhlP40338 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
VhlP40338 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VhlP40338 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VhlP40338 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VhlP40338 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VhlP40338 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VhlP40338 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VhlP40338 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VhlP40338 Gm9013-201ENSMUST00000132939 882 ntBASIC12.51□□□□□ -0.41
VhlP40338 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.51□□□□□ -0.41
VhlP40338 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VhlP40338 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VhlP40338 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.51□□□□□ -0.41
VhlP40338 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VhlP40338 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.51□□□□□ -0.41
VhlP40338 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
VhlP40338 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VhlP40338 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VhlP40338 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VhlP40338 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VhlP40338 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.51□□□□□ -0.41
VhlP40338 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VhlP40338 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms