Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.64■□□□□ 0.09
Cxcl12P40224 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cxcl12P40224 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.63■□□□□ 0.09
Cxcl12P40224 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl12P40224 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl12P40224 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Cxcl12P40224 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl12P40224 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Cxcl12P40224 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl12P40224 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
Cxcl12P40224 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl12P40224 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.63■□□□□ 0.09
Cxcl12P40224 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Cxcl12P40224 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Cxcl12P40224 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Cxcl12P40224 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Cxcl12P40224 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.63■□□□□ 0.09
Cxcl12P40224 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.63■□□□□ 0.09
Cxcl12P40224 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl12P40224 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl12P40224 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl12P40224 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.63■□□□□ 0.09
Cxcl12P40224 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl12P40224 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.63■□□□□ 0.09
Cxcl12P40224 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl12P40224 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.63■□□□□ 0.09
Cxcl12P40224 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl12P40224 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl12P40224 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl12P40224 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cxcl12P40224 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cxcl12P40224 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Cxcl12P40224 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cxcl12P40224 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cxcl12P40224 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Cxcl12P40224 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cxcl12P40224 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cxcl12P40224 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cxcl12P40224 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Cxcl12P40224 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.62■□□□□ 0.09
Cxcl12P40224 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cxcl12P40224 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cxcl12P40224 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Cxcl12P40224 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cxcl12P40224 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cxcl12P40224 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cxcl12P40224 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cxcl12P40224 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Cxcl12P40224 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.61■□□□□ 0.09
Cxcl12P40224 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.61■□□□□ 0.09
Cxcl12P40224 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.61■□□□□ 0.09
Cxcl12P40224 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.61■□□□□ 0.09
Cxcl12P40224 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cxcl12P40224 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cxcl12P40224 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cxcl12P40224 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.6■□□□□ 0.09
Cxcl12P40224 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.6■□□□□ 0.09
Cxcl12P40224 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Cxcl12P40224 Gm14042-201ENSMUST00000120139 833 ntBASIC15.6■□□□□ 0.09
Cxcl12P40224 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.6■□□□□ 0.09
Cxcl12P40224 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.6■□□□□ 0.09
Cxcl12P40224 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.6■□□□□ 0.09
Cxcl12P40224 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cxcl12P40224 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.6■□□□□ 0.09
Cxcl12P40224 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.6■□□□□ 0.09
Cxcl12P40224 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Gm15823-201ENSMUST00000064305 670 ntBASIC15.6■□□□□ 0.09
Cxcl12P40224 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cxcl12P40224 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms