Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.51□□□□□ -0.41
Timp3P39876 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Timp3P39876 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.51□□□□□ -0.41
Timp3P39876 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Timp3P39876 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.51□□□□□ -0.41
Timp3P39876 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Timp3P39876 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Timp3P39876 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Timp3P39876 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
Timp3P39876 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.5□□□□□ -0.41
Timp3P39876 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Timp3P39876 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Timp3P39876 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Timp3P39876 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.5□□□□□ -0.41
Timp3P39876 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Timp3P39876 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Timp3P39876 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.49□□□□□ -0.41
Timp3P39876 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.49□□□□□ -0.41
Timp3P39876 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 Gm15358-201ENSMUST00000119249 520 ntBASIC12.49□□□□□ -0.41
Timp3P39876 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Timp3P39876 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.49□□□□□ -0.41
Timp3P39876 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.49□□□□□ -0.41
Timp3P39876 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.49□□□□□ -0.41
Timp3P39876 Gm37153-201ENSMUST00000193637 231 ntBASIC12.49□□□□□ -0.41
Timp3P39876 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.49□□□□□ -0.41
Timp3P39876 Gm19164-201ENSMUST00000210667 640 ntBASIC12.49□□□□□ -0.41
Timp3P39876 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Timp3P39876 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Timp3P39876 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.48□□□□□ -0.41
Timp3P39876 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Timp3P39876 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Timp3P39876 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Timp3P39876 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Timp3P39876 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Timp3P39876 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms