Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc5P32043 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc5P32043 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc5P32043 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.17□□□□□ -0.14
Hoxc5P32043 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc5P32043 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc5P32043 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.17□□□□□ -0.14
Hoxc5P32043 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc5P32043 Gm17807-201ENSMUST00000186869 298 ntBASIC14.17□□□□□ -0.14
Hoxc5P32043 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hoxc5P32043 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hoxc5P32043 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc5P32043 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Hoxc5P32043 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc5P32043 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc5P32043 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc5P32043 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc5P32043 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hoxc5P32043 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc5P32043 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc5P32043 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc5P32043 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Hoxc5P32043 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.16□□□□□ -0.14
Hoxc5P32043 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.16□□□□□ -0.14
Hoxc5P32043 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.16□□□□□ -0.14
Hoxc5P32043 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.16□□□□□ -0.14
Hoxc5P32043 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hoxc5P32043 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Hoxc5P32043 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Hoxc5P32043 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxc5P32043 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hoxc5P32043 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hoxc5P32043 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hoxc5P32043 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hoxc5P32043 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hoxc5P32043 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.15□□□□□ -0.14
Hoxc5P32043 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.15□□□□□ -0.14
Hoxc5P32043 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hoxc5P32043 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hoxc5P32043 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hoxc5P32043 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hoxc5P32043 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.15□□□□□ -0.14
Hoxc5P32043 Gm7977-201ENSMUST00000193787 748 ntBASIC14.15□□□□□ -0.14
Hoxc5P32043 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.15□□□□□ -0.14
Hoxc5P32043 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.15□□□□□ -0.14
Hoxc5P32043 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hoxc5P32043 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc5P32043 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Hoxc5P32043 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.14□□□□□ -0.15
Hoxc5P32043 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Hoxc5P32043 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc5P32043 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc5P32043 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc5P32043 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc5P32043 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc5P32043 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms