Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm11594-201ENSMUST00000122313 162 ntBASIC14.47□□□□□ -0.09
Slc6a11P31650 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.47□□□□□ -0.09
Slc6a11P31650 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.47□□□□□ -0.09
Slc6a11P31650 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Slc6a11P31650 Mir5131-201ENSMUST00000175426 93 ntBASIC14.47□□□□□ -0.09
Slc6a11P31650 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.47□□□□□ -0.09
Slc6a11P31650 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Slc6a11P31650 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Slc6a11P31650 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Slc6a11P31650 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.47□□□□□ -0.09
Slc6a11P31650 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.47□□□□□ -0.09
Slc6a11P31650 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Slc6a11P31650 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a11P31650 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a11P31650 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a11P31650 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.46□□□□□ -0.09
Slc6a11P31650 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a11P31650 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.46□□□□□ -0.09
Slc6a11P31650 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.46□□□□□ -0.09
Slc6a11P31650 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.46□□□□□ -0.09
Slc6a11P31650 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.46□□□□□ -0.09
Slc6a11P31650 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.46□□□□□ -0.09
Slc6a11P31650 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a11P31650 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a11P31650 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a11P31650 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a11P31650 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Slc6a11P31650 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Slc6a11P31650 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Slc6a11P31650 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Slc6a11P31650 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Slc6a11P31650 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Slc6a11P31650 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Slc6a11P31650 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Slc6a11P31650 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Slc6a11P31650 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Slc6a11P31650 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Slc6a11P31650 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.45□□□□□ -0.1
Slc6a11P31650 Gm7862-201ENSMUST00000121461 292 ntBASIC14.45□□□□□ -0.1
Slc6a11P31650 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Gm25406-201ENSMUST00000157599 105 ntBASIC14.45□□□□□ -0.1
Slc6a11P31650 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.45□□□□□ -0.1
Slc6a11P31650 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.45□□□□□ -0.1
Slc6a11P31650 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.45□□□□□ -0.1
Slc6a11P31650 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Slc6a11P31650 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Slc6a11P31650 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a11P31650 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a11P31650 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a11P31650 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a11P31650 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a11P31650 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Slc6a11P31650 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a11P31650 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a11P31650 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a11P31650 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a11P31650 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.44□□□□□ -0.1
Slc6a11P31650 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a11P31650 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.44□□□□□ -0.1
Slc6a11P31650 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.44□□□□□ -0.1
Slc6a11P31650 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a11P31650 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a11P31650 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a11P31650 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Slc6a11P31650 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a11P31650 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Slc6a11P31650 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms