Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nedd8P29595 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.15□□□□□ -0.14
Nedd8P29595 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Gm18666-201ENSMUST00000190039 958 ntBASIC14.15□□□□□ -0.14
Nedd8P29595 Gm42569-201ENSMUST00000200539 472 ntBASIC14.15□□□□□ -0.14
Nedd8P29595 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Nedd8P29595 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nedd8P29595 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nedd8P29595 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.15□□□□□ -0.14
Nedd8P29595 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nedd8P29595 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nedd8P29595 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Nedd8P29595 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nedd8P29595 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nedd8P29595 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nedd8P29595 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Nedd8P29595 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.14□□□□□ -0.15
Nedd8P29595 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nedd8P29595 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nedd8P29595 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nedd8P29595 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nedd8P29595 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nedd8P29595 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nedd8P29595 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.14□□□□□ -0.15
Nedd8P29595 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nedd8P29595 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nedd8P29595 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nedd8P29595 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nedd8P29595 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.14□□□□□ -0.15
Nedd8P29595 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nedd8P29595 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nedd8P29595 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nedd8P29595 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nedd8P29595 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nedd8P29595 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nedd8P29595 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Nedd8P29595 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Nedd8P29595 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Nedd8P29595 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nedd8P29595 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.13□□□□□ -0.15
Nedd8P29595 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.13□□□□□ -0.15
Nedd8P29595 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.13□□□□□ -0.15
Nedd8P29595 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.13□□□□□ -0.15
Nedd8P29595 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.13□□□□□ -0.15
Nedd8P29595 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nedd8P29595 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nedd8P29595 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nedd8P29595 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nedd8P29595 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nedd8P29595 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nedd8P29595 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nedd8P29595 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.12□□□□□ -0.15
Nedd8P29595 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.12□□□□□ -0.15
Nedd8P29595 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nedd8P29595 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nedd8P29595 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nedd8P29595 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.12□□□□□ -0.15
Nedd8P29595 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.12□□□□□ -0.15
Nedd8P29595 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.12□□□□□ -0.15
Nedd8P29595 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nedd8P29595 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.12□□□□□ -0.15
Nedd8P29595 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nedd8P29595 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nedd8P29595 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Nedd8P29595 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms