Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col2a1P28481 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col2a1P28481 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col2a1P28481 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col2a1P28481 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col2a1P28481 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.14■□□□□ 0.33
Col2a1P28481 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Col2a1P28481 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col2a1P28481 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.14■□□□□ 0.33
Col2a1P28481 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Col2a1P28481 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col2a1P28481 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.14■□□□□ 0.33
Col2a1P28481 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col2a1P28481 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col2a1P28481 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col2a1P28481 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.13■□□□□ 0.33
Col2a1P28481 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col2a1P28481 Gm14767-201ENSMUST00000121559 586 ntBASIC17.13■□□□□ 0.33
Col2a1P28481 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col2a1P28481 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.13■□□□□ 0.33
Col2a1P28481 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col2a1P28481 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col2a1P28481 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col2a1P28481 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col2a1P28481 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col2a1P28481 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.13■□□□□ 0.33
Col2a1P28481 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col2a1P28481 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col2a1P28481 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col2a1P28481 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.13■□□□□ 0.33
Col2a1P28481 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col2a1P28481 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col2a1P28481 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col2a1P28481 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col2a1P28481 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col2a1P28481 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col2a1P28481 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.12■□□□□ 0.33
Col2a1P28481 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Mir7684-201ENSMUST00000183858 60 ntBASIC17.12■□□□□ 0.33
Col2a1P28481 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.12■□□□□ 0.33
Col2a1P28481 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Prob1-201ENSMUST00000097619 3021 ntBASIC17.12■□□□□ 0.33
Col2a1P28481 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.12■□□□□ 0.33
Col2a1P28481 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Gm5566-201ENSMUST00000116118 459 ntBASIC17.12■□□□□ 0.33
Col2a1P28481 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.12■□□□□ 0.33
Col2a1P28481 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col2a1P28481 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.12■□□□□ 0.33
Col2a1P28481 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col2a1P28481 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col2a1P28481 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col2a1P28481 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Col2a1P28481 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col2a1P28481 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.11■□□□□ 0.33
Col2a1P28481 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col2a1P28481 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col2a1P28481 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col2a1P28481 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col2a1P28481 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col2a1P28481 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col2a1P28481 Gm8410-201ENSMUST00000117225 605 ntBASIC17.11■□□□□ 0.33
Col2a1P28481 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col2a1P28481 Gm37230-201ENSMUST00000194491 818 ntBASIC17.11■□□□□ 0.33
Col2a1P28481 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col2a1P28481 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col2a1P28481 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col2a1P28481 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col2a1P28481 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.1■□□□□ 0.33
Col2a1P28481 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col2a1P28481 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col2a1P28481 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col2a1P28481 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col2a1P28481 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col2a1P28481 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col2a1P28481 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col2a1P28481 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col2a1P28481 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col2a1P28481 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.1■□□□□ 0.33
Col2a1P28481 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col2a1P28481 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col2a1P28481 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.1■□□□□ 0.33
Col2a1P28481 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col2a1P28481 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col2a1P28481 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms