Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40lgP27548 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40lgP27548 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40lgP27548 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.07□□□□□ -0.16
Cd40lgP27548 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40lgP27548 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cd40lgP27548 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.06□□□□□ -0.16
Cd40lgP27548 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.06□□□□□ -0.16
Cd40lgP27548 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cd40lgP27548 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Cd40lgP27548 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.06□□□□□ -0.16
Cd40lgP27548 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.06□□□□□ -0.16
Cd40lgP27548 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cd40lgP27548 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.06□□□□□ -0.16
Cd40lgP27548 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.06□□□□□ -0.16
Cd40lgP27548 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cd40lgP27548 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.06□□□□□ -0.16
Cd40lgP27548 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cd40lgP27548 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Cd40lgP27548 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.06□□□□□ -0.16
Cd40lgP27548 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd40lgP27548 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cd40lgP27548 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cd40lgP27548 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Cd40lgP27548 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Cd40lgP27548 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Cd40lgP27548 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Cd40lgP27548 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.05□□□□□ -0.16
Cd40lgP27548 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cd40lgP27548 Mir5131-201ENSMUST00000175426 93 ntBASIC14.05□□□□□ -0.16
Cd40lgP27548 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.05□□□□□ -0.16
Cd40lgP27548 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cd40lgP27548 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.05□□□□□ -0.16
Cd40lgP27548 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cd40lgP27548 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.04□□□□□ -0.16
Cd40lgP27548 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cd40lgP27548 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.04□□□□□ -0.16
Cd40lgP27548 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.04□□□□□ -0.16
Cd40lgP27548 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cd40lgP27548 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cd40lgP27548 Gm11780-201ENSMUST00000136880 516 ntBASIC14.04□□□□□ -0.16
Cd40lgP27548 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.04□□□□□ -0.16
Cd40lgP27548 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.04□□□□□ -0.16
Cd40lgP27548 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.04□□□□□ -0.16
Cd40lgP27548 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Gm6443-201ENSMUST00000203599 874 ntBASIC14.04□□□□□ -0.16
Cd40lgP27548 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cd40lgP27548 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd40lgP27548 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms