Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Irf8P23611 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Irf8P23611 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Irf8P23611 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Irf8P23611 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Irf8P23611 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.41■□□□□ 0.22
Irf8P23611 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Irf8P23611 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Irf8P23611 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.41■□□□□ 0.22
Irf8P23611 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.41■□□□□ 0.22
Irf8P23611 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.41■□□□□ 0.22
Irf8P23611 Gm44771-201ENSMUST00000206975 626 ntBASIC16.41■□□□□ 0.22
Irf8P23611 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.41■□□□□ 0.22
Irf8P23611 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Irf8P23611 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Irf8P23611 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Irf8P23611 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Irf8P23611 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Irf8P23611 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Irf8P23611 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Irf8P23611 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Irf8P23611 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Irf8P23611 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.41■□□□□ 0.22
Irf8P23611 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Irf8P23611 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Irf8P23611 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Irf8P23611 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Irf8P23611 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Irf8P23611 Gm12008-201ENSMUST00000117791 755 ntBASIC16.4■□□□□ 0.22
Irf8P23611 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.4■□□□□ 0.22
Irf8P23611 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.4■□□□□ 0.22
Irf8P23611 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.4■□□□□ 0.22
Irf8P23611 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Irf8P23611 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.4■□□□□ 0.22
Irf8P23611 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Irf8P23611 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.4■□□□□ 0.22
Irf8P23611 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Irf8P23611 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Irf8P23611 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Irf8P23611 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Irf8P23611 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Irf8P23611 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Irf8P23611 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Irf8P23611 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Irf8P23611 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
Irf8P23611 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.39■□□□□ 0.21
Irf8P23611 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Irf8P23611 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.39■□□□□ 0.21
Irf8P23611 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Irf8P23611 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Irf8P23611 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.39■□□□□ 0.21
Irf8P23611 Gm5364-201ENSMUST00000216789 889 ntBASIC16.39■□□□□ 0.21
Irf8P23611 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Irf8P23611 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Irf8P23611 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Irf8P23611 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Irf8P23611 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Irf8P23611 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Irf8P23611 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Irf8P23611 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Irf8P23611 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
Irf8P23611 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Irf8P23611 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Irf8P23611 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Irf8P23611 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Irf8P23611 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.38■□□□□ 0.21
Irf8P23611 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.38■□□□□ 0.21
Irf8P23611 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Irf8P23611 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Irf8P23611 Gm13597-201ENSMUST00000121239 375 ntBASIC16.38■□□□□ 0.21
Irf8P23611 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Irf8P23611 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Irf8P23611 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.38■□□□□ 0.21
Irf8P23611 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Irf8P23611 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Irf8P23611 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Irf8P23611 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Irf8P23611 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.38■□□□□ 0.21
Irf8P23611 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.38■□□□□ 0.21
Irf8P23611 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms