Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prim1P20664 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prim1P20664 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prim1P20664 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Prim1P20664 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prim1P20664 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Prim1P20664 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prim1P20664 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Prim1P20664 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prim1P20664 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Prim1P20664 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
Prim1P20664 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prim1P20664 Gm16026-204ENSMUST00000162652 683 ntBASIC19.32■□□□□ 0.68
Prim1P20664 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.32■□□□□ 0.68
Prim1P20664 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prim1P20664 Gm5312-201ENSMUST00000203728 547 ntBASIC19.32■□□□□ 0.68
Prim1P20664 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prim1P20664 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prim1P20664 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prim1P20664 Gm45251-201ENSMUST00000209486 1465 ntBASIC19.32■□□□□ 0.68
Prim1P20664 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prim1P20664 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prim1P20664 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prim1P20664 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.32■□□□□ 0.68
Prim1P20664 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.32■□□□□ 0.68
Prim1P20664 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prim1P20664 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prim1P20664 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prim1P20664 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prim1P20664 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prim1P20664 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prim1P20664 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC19.31■□□□□ 0.68
Prim1P20664 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prim1P20664 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prim1P20664 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prim1P20664 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19.31■□□□□ 0.68
Prim1P20664 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Prim1P20664 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.31■□□□□ 0.68
Prim1P20664 Auts2-212ENSMUST00000178555 309 ntBASIC19.31■□□□□ 0.68
Prim1P20664 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prim1P20664 Gm43125-201ENSMUST00000201724 730 ntBASIC19.31■□□□□ 0.68
Prim1P20664 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC19.31■□□□□ 0.68
Prim1P20664 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC19.31■□□□□ 0.68
Prim1P20664 Gm18057-201ENSMUST00000208220 503 ntBASIC19.31■□□□□ 0.68
Prim1P20664 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.31■□□□□ 0.68
Prim1P20664 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC19.31■□□□□ 0.68
Prim1P20664 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Prim1P20664 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prim1P20664 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prim1P20664 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Prim1P20664 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prim1P20664 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
Prim1P20664 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prim1P20664 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prim1P20664 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Prim1P20664 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prim1P20664 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prim1P20664 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Prim1P20664 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prim1P20664 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prim1P20664 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Prim1P20664 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prim1P20664 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.3■□□□□ 0.68
Prim1P20664 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.3■□□□□ 0.68
Prim1P20664 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prim1P20664 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Prim1P20664 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.3■□□□□ 0.68
Prim1P20664 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.3■□□□□ 0.68
Prim1P20664 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Prim1P20664 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prim1P20664 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prim1P20664 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Prim1P20664 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prim1P20664 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.3■□□□□ 0.68
Prim1P20664 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Prim1P20664 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prim1P20664 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prim1P20664 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Prim1P20664 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prim1P20664 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prim1P20664 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prim1P20664 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prim1P20664 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prim1P20664 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prim1P20664 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prim1P20664 Celf4-206ENSMUST00000224553 1729 ntBASIC19.29■□□□□ 0.68
Prim1P20664 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prim1P20664 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prim1P20664 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prim1P20664 Gm6973-201ENSMUST00000117080 721 ntBASIC19.29■□□□□ 0.68
Prim1P20664 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC19.29■□□□□ 0.68
Prim1P20664 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC19.29■□□□□ 0.68
Prim1P20664 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.29■□□□□ 0.68
Prim1P20664 Gm15483-201ENSMUST00000120338 456 ntBASIC19.29■□□□□ 0.68
Prim1P20664 Gm13616-201ENSMUST00000120600 222 ntBASIC19.29■□□□□ 0.68
Prim1P20664 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prim1P20664 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prim1P20664 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Prim1P20664 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.29■□□□□ 0.68
Prim1P20664 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms